Publications

Original Papers 2019

• Fermaintt, CS, Sano K, Liu Z, Seino J, Dobbs N, Suzuki T, Fu Y-X, Lehrman MA, Matsuo I, Yan N: A bioactive mammalian disaccharide associated with autoimmunity activates STING-TBK1-dependent immune response. Nature Commun 10, 2377 (2019)
• Hirayama H, Matsuda T, Tsuchiya Y, Oka R, Seino J, Huang C, Nakajima K, Noda Y, Shichino Y, Iwasaki S, Suzuki T: Free glycans derived from O-mannosylated glycoproteins suggest the presence of an O-glycoprotein degradation pathway in yeast. J Biol Chem 294, 15900-15911 (2019) (Selected as “Editors’ Picks)
• Suzuki T: NGLY1-deficiency and the non-lysosomal degradation of free N-glycans. Trends Glycosci. Glycotechnol. 31, SE55-SE56 (2019)
• Chan C, Kamiguchi H, Shimogori T: Spatially restricted long-term transgene expression in the developing skin used for studying the interaction of epidermal development and sensory innervation. Development, Growth & Differentiation 61, 276-282 (2019)
• Guy AT, Kano K, Ohyama J, Kamiguchi H, Hirabayashi Y, Ito Y, Matsuo I, Greimel P: Preference for glucose over inositol headgroup during lysolipid activation of G protein-coupled receptor 55. ACS Chemical Neuroscience 10, 716-727 (2019)
• Nakashima Y, Sakai Y, Mizuno Y, Furuno K, Hirono K, Takatsuki S, Suzuki H, Onouchi Y, Kobayashi T, Tanabe K, Hamase K, Miyamoto T, Aoyagi R, Arita M, Yamamura K, Tanaka T, Nishio H, Takada H, Ohga S, Hara T: Lipidomics links oxidized phosphatidylcholines and coronary arteritis in Kawasaki disease. Cardiovasc Res cvz305 (2019)
• Sawane K, Nagatake T, Hosomi K, Hirata S, Adachi J, Abe Y, Isoyama J, Suzuki H, Matsunaga A, Fukumitsu S, Aida K, Tomonaga T, Arita M, Kunisawa J: Dietary omega-3 fatty acid ameliorates allergic rhinitis via eosinophilic production of the anti-allergic lipid mediator 15-hydroxyeicosapentaenoic acid in mice. Nutrients 11, 2868 (2019)
• Naoe S, Tsugawa H, Takahashi M, Ikeda K, Arita M: Characterization of lipid profiles after dietary intake of polyunsaturated fatty acids using integrated untargeted and targeted lipidomics. Metabolites 9, 241 (2019)
• Shishikura K, Kuroha S, Matsueda S, Iseki H, Matsui T, Inoue A, Arita M: Acyl-CoA synthetase 6 regulates long-chain polyunsaturated fatty acid composition of membrane phospholipids in spermatids and supports normal spermatogenic processes in mice. FASEB J 33, 14194-14203 (2019)
• Miyamoto J, Igarashi M, Watanabe K, Karaki SI, Mukouyama H, Kishino S, Li X, Ichimura A, Irie J, Sugimoto Y, Mizutani T, Sugawara T, Miki T, Ogawa J, Drucker DJ, Arita M, Itoh H, Kimura I: Gut microbiota confers host resistance to obesity by metabolizing dietary polyunsaturated fatty acids. Nat Commun 10, 4007 (2019)
• Sato T, Horikawa M, Takei S, Yamazaki F, Ito TK, Kondo T, Sakurai T, Kahyo T, Ikegami K, Sato S, Sato R, Jinno Y, Kawano H, Naoe S, Arita M, Kashiwagi Y, Setou M: Preferential incorporation of administered eicosapentaenoic acid into thin-cap atherosclerotic plaques. Arterioscler Thromb Vasc Biol 39, 1802-1816 (2019)
• Liebisch G, Ahrends R, Arita M, Arita M, Bowden JA, Ejsing CS, Griffiths WJ, Holcapek M, Kofeler H, Mitchell TW, Wenk MR, Ekroos K: (Lipidomics Standards Initiative Consortium). Lipidomics needs more standardization. Nat Metab 1, 745-747 (2019)
• Watanabe Y, Nagai Y, Honda H, Okamoto N, Yanagibashi T, Ogasawara M, Yamamoto S, Imamura R, Takasaki I, Hara H, Sasahara M, Arita M, Hida S, Taniguchi S, Suda T, Takatsu K: Bi-directional crosstalk between neutrophils and adipocytes promotes adipose tissue inflammation. FASEB J 33, 11821-11835 (2019)
• Tsugawa H, Satoh A, Uchino H, Cajka T, Arita M, Arita M: Mass spectrometry data repository enhances novel metabolite discoveries with advances in computational metabolomics. Metabolites 9, E119 (2019)
• Miyata J, Fukunaga K, Kawashima Y, Watanabe T, Saitoh A, Hirosaki T, Araki Y, Kikawada T, Betsuyaku T, Ohara O, Arita M: Dysregulated fatty acid metabolism in nasal polyp-derived eosinophils from patients with chronic rhinosinusitis. Allergy 74, 1113-1124 (2019)
• Imanishi T, Unno M, Kobayashi W, Yoneda N, Matsuda S, Ikeda K, Hoshi T, Hirao A, Miyake K, Barber GN, Arita M, Ishii KJ, Akira S, Saito T: Reciprocal regulation of STING and TCR signaling by mTORC1 for T-cell activation and function. Life Sci Alliance 2, e201800282 (2019)
• Kawashima Y, Miyata J, Watanabe T, Shioya J, Arita M, Ohara O: Proteogenomic analyses of cellular lysates using a phenol-guanidium thiocyanate reagent. J Proteome Res 18, 301-308 (2019)
• Nagamine T, Inaba T, Sako Y: A nuclear envelop-associated baculovirus protein promotes intranuclear lipid accumulation during infection. Virology. 532:108-117 (2019)
• Inaba T, Murate M, Tomishige N, Lee YF, Hullin-Matsuda F, Pollet B, Humbert N, Mély Y, Sako Y, Greimel P, Kobayashi T: Formation of tubules and helical ribbons by ceramide phosphoethanolamine-containing membranes. Sci Rep. 9(1):5812 (2019)
• Sato M, Aoki-Saito H, Fukuda H, Ikeda H, Koga Y, Yatomi M, Tsurumaki H, Maeno T, Saito T, Nakakura T, Mori T, Yanagawa M, Abe M, Sako Y, Dobashi K, Ishizuka T, Yamada M, Shuto S, Hisada T: Resolvin E3 attenuates allergic airway inflammation via the interleukin-23-interleukin-17A pathway. FASEB J. 33(11):12750-12759 (2019)
• Lelieveld LT, Mirzaian M, Kuo CL, Artola M, Ferraz MJ, Peter REA, Akiyama H, Greimel P, van den Berg RJBHN, Overkleeft HS, Boot RG, Meijer AH, Aerts JMFG: Role of beta-glucosidase 2 in aberrant glycosphingolipid metabolism: model of glucocerebrosidase deficiency in zebrafish. J. Lipid Res., 60 (11), 1851-1867 (2019)
• Arnal-Levron M, Chen Y, Greimel P, Calevro F, Gaget K, Riols F, Batut A, Bertrand-Michel J., Hullin-Matsuda F, Olkkonen VM, Delton I, Luquain-Costaz C：Bis(monoacylglycero)phosphate regulates oxysterol binding protein-related protein 11 dependent sterol trafficking. Biochim Biophys Acta Mol Cell Biol Lipids, 1864 (9), 1247-1257 (2019)
• Yokoyama N, Kim YJ, Hirabayashi Y, Tabe Y, Takamori K, Ogawa H, Iwabuchi K: Kras promotes myeloid differentiation through Wnt/β-catenin signaling. FASEB BioAdvances. 1(7):435-449(2019)
• Ikuno M, Yamakado H, Akiyama H, Parajuli LK, Taguchi K, Hara J, Uemura N, Hatanaka Y, Higaki K, Ohno K, Tanaka M, Koike M, Hirabayashi Y, Takahashi R: GBA haploinsufficiency accelerates alpha-synuclein pathology with altered lipid metabolism in a prodromal model of Parkinson's disease. Hum Mol Genet. 28(11),1894-1904 (2019)
• Tsugawa H, Nakabayashi R, Mori T, Yamada Y, Takahashi M, Rai A, Sugiyama R, Yamamoto H, Nakaya T, Yamazaki M, Kooke R, Bac-Molenaar JA, Oztolan-Erol N, Keurentjes JJB, Arita M, Saito K: A cheminformatics approach to characterize metabolomes in stable-isotope-labeled organisms. Nature Methods, 16(4), 295-298, (2019)
• Sato M, Arita M, Kawashima T: Uncovering Ecdysozoa-specific Sphingomyelin Synthase by Phylogenetic Analysis of Metazoan Sequences. Zoological Science 36(4), 316-321, (2019)
• Tada I, Tsugawa H, Meister I, Zhang P, Shu R, Katsumi R, Wheelock CE, Arita M, Chaleckis R: Creating a Reliable Mass Spectral-Retention Time Library for All Ion Fragmentation-Based Metabolomics. Metabolites 9(11), 251, (2019)
• Tanei T, Pradipta AR, Morimoto K, Fujii M, Arata M, Ito A, Yoshida M, Saigitbatalova E, Kurbangalieva A, Ikeda JI, Morii E, Noguchi S, Tanaka K: Cascade reaction in human live tissue allows clinically applicable diagnosis of breast cancer morphology. Adv. Sci., 6, 1801479 (2019)
• Tanei T, Pradipta AR, Morimoto K, Fujii M, Ikeda JI, Morii E, Noguchi S, Tanaka K: "Click-to-sense" acrolein probe allows highly discriminative, rapid, low-cost and easy-to-perform diagnosis of breast cancer morphology in live tissues. Breast J., 44 (S1), S26-S27 (2019)
• Fujiki K, Kanayama Y, Yano S, Sato N, Yokokita T, Ahmadi P, Watanabe Y, Haba H, Tanaka K: 211At-Labeled immunoconjugate via a one-pot three-component double click strategy: Practical access to α-emission cancer radiotherapeutics. Chem. Sci., 10, 1936-1944 (2019)
• Sharafutdinov IS, Pavlova AS, Khabibrakhmanova AM, Faizova RG, Kurbangalieva AR, Tanaka K, Trizna EY, Baidamshina DR, Bogachev MI, Kayumov AR: Targeting Bacillus cereus cells: Increasing efficiency of antimicrobials by the bornyl-possessing 2(5H)-furanone derivative. New Microbiol., 42, 29-36 (2019)
• Nakamura K., Tsubokura K., Kurbangalieva A., Nakao Y., Murase T., Shimoda T., Tanaka K: Efficient route to RIKEN click probes for glycoconjugation. J. Carbohydr. Chem., 38, 127-138 (2019)
• Kishimoto A, Nomura S, Tanaka K: Chemical sensing of acrolein-amine conjugates for food quality control: A case study of milk products, Bull. Chem. Soc. Jpn., 92, 1018-1023 (2019)
• Pradipta AR, Fujii M, Tanei T, Morimoto K, Shimazu K, Noguchi S, Tanaka K: Tetramethylrhodamine is an essential scaffold of azide probe in detecting cellular acrolein. Bioorg. Med. Chem., 27, 2228-2234 (2019)
• Eda S, Nasibullin I, Vong K, Kudo N, Yoshida M, Kurbangalieva A, Tanaka K: Biocompatibility and therapeutic potential of glycosilated albumin artificial metalloenzymes. Nature Catal., 2, 780-792 (2019).
• Tanaka K: In vivo glycan pattern recognition towards drug delivery system and therapeutic in vivo synthetic chemistry. Trend In Glycoscience and Glycotechnology (TIGG), 31, SE61-62 (2019)
• Chulakova DR, Pradipta AR, Lodochnikova OA, Kuznetsov DR, Bulygina KS, Smirnov IS, Usachev KS, Latypova LZ, Kurbangalieva AR, Tanaka K: Facile access to optically active 2,6-dialkyl-1,5-diazacyclooctanes. Chem. Asian J., 14, 4048-4054 (2019)
• Manabe Y, Marchetti R, Takakura Y, Nagasaki M, Nihei W, Takebe T, Tanaka K, Kabayama K, Chiodo F, Hanashima S, Kamada Y, Miyoshi E, Dulal HP, Yamaguchi Y, Adachi Y, Ohno N, Tanaka H, Silipo A, Fukase K, Molinaro A: The core fucose on an IgG antibody is an endogenous ligand of Dectin-1. Angew. Chem. Int. Ed., 58, 18697-18702 (2019)
• Taniguchi N, Endo T, Hirabayashi J, Nishihara S, Kadomatsu K, Akiyoshi K, Aoki-Kinoshita KF (eds): Glycoconjugates and Glycoclusters as New Drug Delivery Molecules for In Vivo Molecular Imaging and Therapeutics, Tanaka K., In Glycoscience: Basic Science to Applications, Springer, 56-57 (2019)
• Vong K, Eda S, Kadota Y, Nasibullin I, Wakatake T, Yokoshima S, Shirasu K, Tanaka K: An artificial metalloenzyme biosensor can detect ethylene gas in fruits and Arabidopsis leaves. Nature Commun. 10, 5746 (2019)